Latest Module Specifications
Current Academic Year 2025 - 2026
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Description This practical module will cover the key skills in large-scale human genomic data analysis. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Learning Outcomes 1. 1E0329DE-FC8B-0001-7DFD-1BB0A3A32400 2. Access and extract data from genomic databases 5. 1 6. 1DF13751-C3CB-0001-E6E9-145D1EB0A9E0 7. Run bioinformatic software on Linux 10. 2 11. 1D6476DB-550E-0001-E41D-1B108200AF80 12. Prepare and assess high-throughput molecular data 15. 6 16. 1DF13751-DB86-0001-10E7-1A2893E06130 17. Understand and implement appropriate data quality control prior to analysing human genomic data 20. 3 21. 1DF13751-F386-0001-933A-B4B31A20A750 22. Statistically assess the influence of genomic variation on human traits through genome-wide association studies 25. 4 26. 1DF13751-E283-0001-DA15-C9E018E21FE0 27. Identify variation in human next generation sequencing data 30. 5 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
All module information is indicative and subject to change. For further information,students are advised to refer to the University's Marks and Standards and Programme Specific Regulations at: http://www.dcu.ie/registry/examinations/index.shtml |
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Indicative Content and Learning Activities
Introduction to human genomic databases, repositories and tools Refresher on Linux Refresher on R Genome-wide association studies: Data formats and quality control Genome-wide association studies: Statistical analysis Targeted panel sequence analysis | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Indicative Reading List Books: None Articles: None | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Other Resources None | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||